Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.64■□□□□ 0.42
RNF41Q9H4P4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF41Q9H4P4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF41Q9H4P4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 AC018529.2-202ENST00000611482 3087 ntBASIC17.64■□□□□ 0.41
RNF41Q9H4P4 AP002414.2-201ENST00000591780 3365 ntBASIC17.64■□□□□ 0.41
RNF41Q9H4P4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 MIR600HG-201ENST00000449175 5984 ntBASIC17.64■□□□□ 0.41
RNF41Q9H4P4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 CHMP1AP1-201ENST00000445563 662 ntBASIC17.64■□□□□ 0.41
RNF41Q9H4P4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 BX088702.1-201ENST00000610784 235 ntBASIC17.64■□□□□ 0.41
RNF41Q9H4P4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF41Q9H4P4 AC009093.2-202ENST00000620513 2079 ntBASIC17.63■□□□□ 0.41
RNF41Q9H4P4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 AC244107.1-201ENST00000442033 332 ntBASIC17.63■□□□□ 0.41
RNF41Q9H4P4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 AL583810.1-201ENST00000553344 1045 ntBASIC17.63■□□□□ 0.41
RNF41Q9H4P4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 EEF1DP1-201ENST00000585891 896 ntBASIC17.63■□□□□ 0.41
RNF41Q9H4P4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 AC007292.2-201ENST00000593524 1812 ntBASIC17.63■□□□□ 0.41
RNF41Q9H4P4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF41Q9H4P4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms