Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 AC011840.2-201ENST00000563063 1520 ntBASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHACTR1Q9C0D0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 KRT8P35-201ENST00000483942 1338 ntBASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AL139094.1-201ENST00000405549 1188 ntBASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AC107890.1-201ENST00000422478 521 ntBASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AC092580.3-201ENST00000430932 139 ntBASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHACTR1Q9C0D0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 RPL13AP25-201ENST00000484130 612 ntBASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 AC067863.1-201ENST00000494933 530 ntBASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 RARRES2P5-201ENST00000564013 466 ntBASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 AC004449.1-201ENST00000564240 433 ntBASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 AP001160.2-201ENST00000596071 487 ntBASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 AC139530.3-201ENST00000620344 690 ntBASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PHACTR1Q9C0D0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms