Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 AC097359.3-201ENST00000603982 1210 ntBASIC14.19□□□□□ -0.14
NR1H4Q96RI1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 AC012617.1-204ENST00000586340 2305 ntBASIC14.18□□□□□ -0.14
NR1H4Q96RI1 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 REXO1L4P-201ENST00000605109 1937 ntBASIC14.18□□□□□ -0.14
NR1H4Q96RI1 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 AF238378.1-201ENST00000526806 358 ntBASIC14.18□□□□□ -0.14
NR1H4Q96RI1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 MIR4515-201ENST00000584082 81 ntBASIC14.18□□□□□ -0.14
NR1H4Q96RI1 AC006557.2-201ENST00000592985 1240 ntBASIC14.18□□□□□ -0.14
NR1H4Q96RI1 AC025062.2-201ENST00000605477 670 ntBASIC14.18□□□□□ -0.14
NR1H4Q96RI1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 AL022323.5-201ENST00000624101 2059 ntBASIC14.18□□□□□ -0.14
NR1H4Q96RI1 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.18□□□□□ -0.14
NR1H4Q96RI1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 AC073439.1-201ENST00000624121 1774 ntBASIC14.17□□□□□ -0.14
NR1H4Q96RI1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H4Q96RI1 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms