Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 Z97180.1-201ENST00000445173 988 ntBASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 AC245884.6-201ENST00000515672 1067 ntBASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 AC006058.4-201ENST00000624016 1670 ntBASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 MBLAC2-202ENST00000514906 1936 ntBASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 TUBB8P8-201ENST00000458717 1058 ntBASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 FGFR3P5-201ENST00000564496 886 ntBASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 MIR3619-201ENST00000579667 83 ntBASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 AC090164.2-201ENST00000611487 516 ntBASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 AC136759.1-202ENST00000530858 2194 ntBASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC85AQ96PX6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC85AQ96PX6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CCDC85AQ96PX6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC85AQ96PX6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CCDC85AQ96PX6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CCDC85AQ96PX6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC85AQ96PX6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CCDC85AQ96PX6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC85AQ96PX6 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AL160314.3-201ENST00000556041 767 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AC005962.1-201ENST00000584100 773 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AC008805.1-201ENST00000590892 364 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AC132192.2-201ENST00000596206 1147 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AC016629.1-201ENST00000596579 586 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AC015967.2-201ENST00000624092 234 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AC006435.4-201ENST00000625037 234 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AL356737.1-201ENST00000634391 234 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 NFIC-211ENST00000641145 8399 ntBASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms