Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC7Q96M83 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC7Q96M83 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC7Q96M83 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC7Q96M83 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC7Q96M83 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC7Q96M83 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC7Q96M83 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 BTBD6P1-201ENST00000412176 1267 ntBASIC20.76■□□□□ 0.91
CCDC7Q96M83 FTLP10-202ENST00000505798 471 ntBASIC20.76■□□□□ 0.91
CCDC7Q96M83 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.76■□□□□ 0.91
CCDC7Q96M83 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 AC132938.4-201ENST00000623835 848 ntBASIC20.76■□□□□ 0.91
CCDC7Q96M83 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC7Q96M83 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC7Q96M83 AHCYP2-201ENST00000430630 1300 ntBASIC20.75■□□□□ 0.91
CCDC7Q96M83 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC7Q96M83 AC026748.1-201ENST00000624349 3251 ntBASIC20.75■□□□□ 0.91
CCDC7Q96M83 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 AC004898.1-201ENST00000451057 766 ntBASIC20.75■□□□□ 0.91
CCDC7Q96M83 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 RNA5SP486-201ENST00000515961 83 ntBASIC20.75■□□□□ 0.91
CCDC7Q96M83 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC7Q96M83 AL021578.1-201ENST00000613646 709 ntBASIC20.75■□□□□ 0.91
CCDC7Q96M83 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC7Q96M83 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC7Q96M83 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC7Q96M83 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC7Q96M83 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CCDC7Q96M83 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 FKBP4P6-201ENST00000457486 1332 ntBASIC20.75■□□□□ 0.91
CCDC7Q96M83 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC7Q96M83 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC7Q96M83 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 AC005089.1-201ENST00000619486 2241 ntBASIC20.74■□□□□ 0.91
CCDC7Q96M83 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 MTX1P1-201ENST00000440904 838 ntBASIC20.74■□□□□ 0.91
CCDC7Q96M83 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 SCARNA20.5-201ENST00000516991 142 ntBASIC20.74■□□□□ 0.91
CCDC7Q96M83 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 AP006547.1-201ENST00000563435 692 ntBASIC20.74■□□□□ 0.91
CCDC7Q96M83 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 AGGF1P1-201ENST00000509500 2073 ntBASIC20.74■□□□□ 0.91
CCDC7Q96M83 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 AC092135.3-201ENST00000624151 1846 ntBASIC20.74■□□□□ 0.91
CCDC7Q96M83 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC7Q96M83 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC7Q96M83 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms