Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AC093813.1-201ENST00000605066 256 ntBASIC15.55■□□□□ 0.08
IFT43Q96FT9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AL138799.1-201ENST00000448213 1675 ntBASIC15.54■□□□□ 0.08
IFT43Q96FT9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 TMEM14DP-201ENST00000422205 345 ntBASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 GAPDHP40-201ENST00000505218 1006 ntBASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC120045.2-201ENST00000567334 178 ntBASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AC233724.13-201ENST00000598383 410 ntBASIC15.54■□□□□ 0.08
IFT43Q96FT9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IFT43Q96FT9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.54■□□□□ 0.08
IFT43Q96FT9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 AC067750.1-201ENST00000608826 6545 ntBASIC15.53■□□□□ 0.08
IFT43Q96FT9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 REXO1L4P-201ENST00000605109 1937 ntBASIC15.53■□□□□ 0.08
IFT43Q96FT9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 C1QBPP1-201ENST00000400117 770 ntBASIC15.53■□□□□ 0.08
IFT43Q96FT9 AC104457.1-201ENST00000401024 814 ntBASIC15.53■□□□□ 0.08
IFT43Q96FT9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 USP32P1-208ENST00000506594 1164 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms