Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.33□□□□□ -0.12
NMD3Q96D46 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.33□□□□□ -0.12
NMD3Q96D46 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.33□□□□□ -0.12
NMD3Q96D46 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.33□□□□□ -0.12
NMD3Q96D46 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.33□□□□□ -0.12
NMD3Q96D46 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.33□□□□□ -0.12
NMD3Q96D46 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.33□□□□□ -0.12
NMD3Q96D46 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.33□□□□□ -0.12
NMD3Q96D46 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.33□□□□□ -0.12
NMD3Q96D46 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.33□□□□□ -0.12
NMD3Q96D46 AC105339.1-204ENST00000636249 355 ntBASIC14.33□□□□□ -0.12
NMD3Q96D46 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.33□□□□□ -0.12
NMD3Q96D46 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NMD3Q96D46 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 BEND3P3-201ENST00000611030 2440 ntBASIC14.33□□□□□ -0.12
NMD3Q96D46 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NMD3Q96D46 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NMD3Q96D46 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.33□□□□□ -0.12
NMD3Q96D46 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NMD3Q96D46 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 AP001282.1-201ENST00000531301 1499 ntBASIC14.32□□□□□ -0.12
NMD3Q96D46 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.32□□□□□ -0.12
NMD3Q96D46 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
NMD3Q96D46 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.32□□□□□ -0.12
NMD3Q96D46 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.32□□□□□ -0.12
NMD3Q96D46 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.32□□□□□ -0.12
NMD3Q96D46 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.32□□□□□ -0.12
NMD3Q96D46 DNAJB3-201ENST00000446806 729 ntBASIC14.32□□□□□ -0.12
NMD3Q96D46 TIMM8BP1-201ENST00000452384 211 ntBASIC14.32□□□□□ -0.12
NMD3Q96D46 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.32□□□□□ -0.12
NMD3Q96D46 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.32□□□□□ -0.12
NMD3Q96D46 AC005829.1-201ENST00000570002 483 ntBASIC14.32□□□□□ -0.12
NMD3Q96D46 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
NMD3Q96D46 AC024267.1-201ENST00000582320 895 ntBASIC14.32□□□□□ -0.12
NMD3Q96D46 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.32□□□□□ -0.12
NMD3Q96D46 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.32□□□□□ -0.12
NMD3Q96D46 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.32□□□□□ -0.12
NMD3Q96D46 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.32□□□□□ -0.12
NMD3Q96D46 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.32□□□□□ -0.12
NMD3Q96D46 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 CES1P1-201ENST00000421606 1704 ntBASIC14.32□□□□□ -0.12
NMD3Q96D46 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NMD3Q96D46 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NMD3Q96D46 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.31□□□□□ -0.12
NMD3Q96D46 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.31□□□□□ -0.12
NMD3Q96D46 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms