Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AC027796.2-201ENST00000575326 344 ntBASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AL158211.3-201ENST00000607385 239 ntBASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AF228730.6-201ENST00000641497 218 ntBASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AC084121.3-201ENST00000641716 218 ntBASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 PEG13-201ENST00000631594 5667 ntBASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 AC107918.4-201ENST00000641966 3141 ntBASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 AL928921.2-201ENST00000641325 2442 ntBASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 DMBT1P1-203ENST00000636837 4628 ntBASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXRED1Q96CU9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXRED1Q96CU9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms