Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.91□□□□□ -0.18
HPS1Q92902 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 MIR943-201ENST00000401286 94 ntBASIC13.91□□□□□ -0.18
HPS1Q92902 AL035633.1-201ENST00000406139 838 ntBASIC13.91□□□□□ -0.18
HPS1Q92902 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.91□□□□□ -0.18
HPS1Q92902 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.91□□□□□ -0.18
HPS1Q92902 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.91□□□□□ -0.18
HPS1Q92902 AC026150.2-201ENST00000564693 1156 ntBASIC13.91□□□□□ -0.18
HPS1Q92902 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.91□□□□□ -0.18
HPS1Q92902 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.91□□□□□ -0.18
HPS1Q92902 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.91□□□□□ -0.18
HPS1Q92902 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 KRT8P44-201ENST00000441609 1350 ntBASIC13.91□□□□□ -0.18
HPS1Q92902 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
HPS1Q92902 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HPS1Q92902 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.91□□□□□ -0.18
HPS1Q92902 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
HPS1Q92902 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 AL109620.1-201ENST00000618738 1197 ntBASIC13.9□□□□□ -0.18
HPS1Q92902 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HPS1Q92902 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 AC015909.5-201ENST00000624336 2266 ntBASIC13.9□□□□□ -0.18
HPS1Q92902 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HPS1Q92902 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.9□□□□□ -0.18
HPS1Q92902 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.9□□□□□ -0.18
HPS1Q92902 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HPS1Q92902 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC13.9□□□□□ -0.19
HPS1Q92902 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HPS1Q92902 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HPS1Q92902 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms