Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 RPL3P9-201ENST00000463217 1183 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC068620.1-201ENST00000470544 798 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TRAV33-201ENST00000557514 338 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC091153.4-201ENST00000570493 480 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC005777.1-201ENST00000588332 187 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AL078624.1-201ENST00000604004 547 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 GH2-205ENST00000622506 702 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AL592424.1-201ENST00000563624 1536 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 MIR632-201ENST00000385193 94 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 MED20-204ENST00000409312 932 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 RPL18AP16-201ENST00000424057 531 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC092865.2-201ENST00000439409 971 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC015818.1-201ENST00000451011 244 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 RN7SL748P-201ENST00000483066 311 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC007622.1-201ENST00000488371 535 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 RN7SL553P-201ENST00000482215 298 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 GYG1-209ENST00000483267 801 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 TMEM255B-205ENST00000488362 694 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL139384.1-201ENST00000612143 3047 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 FAM90A27P-201ENST00000593323 1370 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 FAM90A28P-202ENST00000597191 1374 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL591122.2-201ENST00000624125 1853 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 SLC35A5-207ENST00000494706 840 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC132216.1-201ENST00000610375 1158 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AC113385.2-201ENST00000614465 762 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL645937.2-201ENST00000396808 931 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 PDHX-202ENST00000430469 952 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 BICD1P1-201ENST00000457832 1222 ntBASIC5.8□□□□□ -1.48
SYNE2Q8WXH0 RN7SL638P-201ENST00000494527 290 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms