Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 AC092135.3-201ENST00000624151 1846 ntBASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 ZNF877P-201ENST00000437614 612 ntBASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 RN7SL556P-201ENST00000582856 298 ntBASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 AC026336.4-201ENST00000624565 1050 ntBASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 CASP3-205ENST00000517513 964 ntTSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
ALMS1Q8TCU4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ODCP-201ENST00000459650 1639 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 HNRNPA1P5-201ENST00000558213 966 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AC103563.1-201ENST00000429316 123 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 LY6E-215ENST00000523847 427 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 TEKT4P2-202ENST00000559466 1312 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 SIRPB3P-201ENST00000340424 1216 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 HLA-DMA-202ENST00000395303 1007 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 RPL3P2-204ENST00000413027 1203 ntBASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC9.73□□□□□ -0.85
ALMS1Q8TCU4 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms