Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 CRB3P1-201ENST00000449338 276 ntBASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AC022137.2-201ENST00000503482 481 ntBASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AC092364.2-202ENST00000597012 1073 ntBASIC14.07□□□□□ -0.16
NUP43Q8NFH3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP43Q8NFH3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NUP43Q8NFH3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms