Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 CNN2P2-201ENST00000443536 909 ntBASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 CNN2P3-201ENST00000450201 906 ntBASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 KRT18P43-201ENST00000469825 1281 ntBASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AC092865.5-201ENST00000545435 363 ntBASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AL136317.3-201ENST00000618497 906 ntBASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DNAAF1Q8NEP3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AC104457.1-201ENST00000401024 814 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AC004967.1-201ENST00000453589 447 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 RN7SL618P-201ENST00000477850 296 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 SDHAP3-202ENST00000515467 728 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AC027612.4-201ENST00000605371 583 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 TEX28P1-201ENST00000613479 1221 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 TEX28P2-201ENST00000617764 1221 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AC134684.3-201ENST00000641758 218 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AC015802.1-201ENST00000588104 1449 ntBASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DNAAF1Q8NEP3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms