Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 AC010900.1-201ENST00000449849 1296 ntBASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 AC106047.2-201ENST00000511723 743 ntBASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 AC007292.2-201ENST00000593524 1812 ntBASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCDC168Q8NDH2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AC023141.7-201ENST00000430646 407 ntBASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AL157407.1-201ENST00000435784 904 ntBASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 BCL2L12P1-201ENST00000508390 733 ntBASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 EMC4-208ENST00000559078 599 ntTSL 3 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 CYP4F36P-201ENST00000589193 186 ntBASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 AL138725.1-201ENST00000407347 1314 ntBASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC168Q8NDH2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms