Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 COL6A4P2-202ENST00000504443 2753 ntBASIC12.57□□□□□ -0.4
COMMD1Q8N668 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AC009477.1-201ENST00000452936 217 ntBASIC12.57□□□□□ -0.4
COMMD1Q8N668 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 SDHAP3-202ENST00000515467 728 ntBASIC12.57□□□□□ -0.4
COMMD1Q8N668 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AC190387.1-201ENST00000551683 408 ntBASIC12.57□□□□□ -0.4
COMMD1Q8N668 AC027307.3-201ENST00000594262 1100 ntBASIC12.57□□□□□ -0.4
COMMD1Q8N668 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.57□□□□□ -0.4
COMMD1Q8N668 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.57□□□□□ -0.4
COMMD1Q8N668 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 AL023775.1-201ENST00000454907 1746 ntBASIC12.57□□□□□ -0.4
COMMD1Q8N668 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COMMD1Q8N668 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
COMMD1Q8N668 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COMMD1Q8N668 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.56□□□□□ -0.4
COMMD1Q8N668 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 AC015802.1-201ENST00000588104 1449 ntBASIC12.56□□□□□ -0.4
COMMD1Q8N668 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.56□□□□□ -0.4
COMMD1Q8N668 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
COMMD1Q8N668 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.56□□□□□ -0.4
COMMD1Q8N668 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COMMD1Q8N668 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COMMD1Q8N668 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms