Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AL138709.1-201ENST00000614840 1693 ntBASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 TLE1P1-201ENST00000422965 589 ntBASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AC007969.1-201ENST00000433675 447 ntBASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 FO681548.1-201ENST00000455617 1132 ntBASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AC026434.2-201ENST00000506094 1078 ntBASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 LINC00554-201ENST00000564841 3011 ntBASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 MIR193BHG-211ENST00000641433 5365 ntBASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RAB42Q8N4Z0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 CD8B2-202ENST00000417670 633 ntBASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 KLF2P4-201ENST00000451959 1225 ntBASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 AC138951.2-201ENST00000623455 1161 ntBASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 DBET-201ENST00000630918 3363 ntBASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB42Q8N4Z0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms