Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC82Q8N4S0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 ACA64.2-201ENST00000459014 129 ntBASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 MIR6775-201ENST00000617557 69 ntBASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC82Q8N4S0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 INE2-201ENST00000630399 1874 ntBASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC82Q8N4S0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 ANKRD19P-201ENST00000338192 862 ntBASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 MIR1909-201ENST00000411312 80 ntBASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 AC234783.1-201ENST00000441761 496 ntBASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 CTBP2P5-201ENST00000454986 1264 ntBASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 AC078819.1-201ENST00000547454 765 ntBASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 AC012085.1-201ENST00000548270 765 ntBASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 ENPP7P14-201ENST00000621765 1040 ntBASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC82Q8N4S0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms