Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AC138696.2-201ENST00000607376 223 ntBASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AC009093.2-202ENST00000620513 2079 ntBASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 AC002472.3-201ENST00000640124 621 ntBASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCN4BQ8IWT1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 AC020907.1-201ENST00000616460 1350 ntBASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 HSPB1P2-201ENST00000448722 546 ntBASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 AC100850.1-201ENST00000506768 649 ntBASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 AC244093.1-201ENST00000610837 814 ntBASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 MIR6787-201ENST00000616675 61 ntBASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SCN4BQ8IWT1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 AL136301.1-201ENST00000615830 422 ntBASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 AL008638.5-201ENST00000623814 1298 ntBASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 SALL4P5-201ENST00000419001 1760 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms