Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 PUDPP3-201ENST00000445368 636 ntBASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 CICP12-201ENST00000455801 843 ntBASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 RPL18P13-201ENST00000478088 569 ntBASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 AC022217.1-201ENST00000521069 738 ntBASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 AC068587.8-201ENST00000641239 219 ntBASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE3BQ7Z3V4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 AC106794.1-201ENST00000506935 792 ntBASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 RN7SL163P-201ENST00000583100 276 ntBASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 AL645939.5-201ENST00000606834 243 ntBASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 AP002414.2-201ENST00000591780 3365 ntBASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 AJ011931.1-201ENST00000618749 2492 ntBASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE3BQ7Z3V4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 CYP46A4P-201ENST00000414953 267 ntBASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 SLC25A24P2-201ENST00000415059 510 ntBASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 Z98259.2-201ENST00000641583 609 ntBASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms