Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 MEX3B-202ENST00000558133 4333 ntBASIC13.22□□□□□ -0.29
C11orf88Q6PI97 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 KRT8P48-201ENST00000515599 1220 ntBASIC13.22□□□□□ -0.29
C11orf88Q6PI97 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 SPCS2P1-201ENST00000561636 679 ntBASIC13.22□□□□□ -0.29
C11orf88Q6PI97 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.22□□□□□ -0.29
C11orf88Q6PI97 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.21□□□□□ -0.29
C11orf88Q6PI97 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 AC093512.1-201ENST00000617969 520 ntBASIC13.21□□□□□ -0.29
C11orf88Q6PI97 AC084121.4-201ENST00000641598 221 ntBASIC13.21□□□□□ -0.29
C11orf88Q6PI97 AF228730.8-201ENST00000642140 221 ntBASIC13.21□□□□□ -0.29
C11orf88Q6PI97 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C11orf88Q6PI97 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms