Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC073621.1-201ENST00000392730 636 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 KRT18P27-201ENST00000427733 1299 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 FGFR3P6-201ENST00000457012 610 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 SCARNA2-201ENST00000458748 420 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC008608.2-201ENST00000606089 416 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC012306.2-201ENST00000609350 630 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 MIR1199-201ENST00000621445 119 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC004790.2-201ENST00000623588 572 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC107918.4-202ENST00000641623 219 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC068760.1-201ENST00000493579 1953 ntBASIC11.39□□□□□ -0.59
MRPL54Q6P161 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL54Q6P161 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL54Q6P161 AC111170.3-201ENST00000624282 2464 ntBASIC11.38□□□□□ -0.59
MRPL54Q6P161 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 AL354702.1-201ENST00000442006 1960 ntBASIC11.38□□□□□ -0.59
MRPL54Q6P161 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 AC092474.2-201ENST00000424288 719 ntBASIC11.38□□□□□ -0.59
MRPL54Q6P161 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL54Q6P161 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL54Q6P161 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms