Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 HLA-K-203ENST00000430151 1046 ntBASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 AC022210.1-201ENST00000449856 793 ntBASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TTC39BQ5VTQ0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 AC140479.7-201ENST00000636301 2332 ntBASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 AC133552.6-201ENST00000613406 534 ntBASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TTC39BQ5VTQ0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms