Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PCDHB19P-201ENST00000570871 2371 ntBASIC14.28□□□□□ -0.12
RIF1Q5UIP0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 FUCA1P1-201ENST00000374476 1351 ntBASIC14.28□□□□□ -0.12
RIF1Q5UIP0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 PYY2-201ENST00000315776 282 ntBASIC14.27□□□□□ -0.12
RIF1Q5UIP0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 GEMIN8P4-201ENST00000380526 729 ntBASIC14.27□□□□□ -0.12
RIF1Q5UIP0 TLE1P1-201ENST00000422965 589 ntBASIC14.27□□□□□ -0.12
RIF1Q5UIP0 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 RN7SL288P-201ENST00000490496 291 ntBASIC14.27□□□□□ -0.12
RIF1Q5UIP0 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 AC011431.1-201ENST00000512971 230 ntBASIC14.27□□□□□ -0.12
RIF1Q5UIP0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 AC078814.4-201ENST00000546650 327 ntBASIC14.27□□□□□ -0.12
RIF1Q5UIP0 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.27□□□□□ -0.12
RIF1Q5UIP0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 AL513523.2-202ENST00000427283 2040 ntBASIC14.27□□□□□ -0.12
RIF1Q5UIP0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RIF1Q5UIP0 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 AC073869.2-201ENST00000417338 1026 ntBASIC14.27□□□□□ -0.13
RIF1Q5UIP0 MIR4254-201ENST00000581063 76 ntBASIC14.27□□□□□ -0.13
RIF1Q5UIP0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.27□□□□□ -0.13
RIF1Q5UIP0 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC008026.2-201ENST00000495438 348 ntBASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC147876.1-201ENST00000504408 322 ntBASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC021321.1-201ENST00000607397 1113 ntBASIC14.26□□□□□ -0.13
RIF1Q5UIP0 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms