Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CHRNB3Q05901 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHRNB3Q05901 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 CNN2P2-201ENST00000443536 909 ntBASIC14.29□□□□□ -0.12
CHRNB3Q05901 CNN2P3-201ENST00000450201 906 ntBASIC14.29□□□□□ -0.12
CHRNB3Q05901 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 AC069335.1-201ENST00000489972 472 ntBASIC14.29□□□□□ -0.12
CHRNB3Q05901 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 AL136317.3-201ENST00000618497 906 ntBASIC14.29□□□□□ -0.12
CHRNB3Q05901 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.29□□□□□ -0.12
CHRNB3Q05901 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHRNB3Q05901 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.28□□□□□ -0.12
CHRNB3Q05901 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRNB3Q05901 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CHRNB3Q05901 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms