Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTRA3P83110 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.91■□□□□ 0.3
HTRA3P83110 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTRA3P83110 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTRA3P83110 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.9■□□□□ 0.3
HTRA3P83110 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.9■□□□□ 0.3
HTRA3P83110 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC16.9■□□□□ 0.3
HTRA3P83110 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC16.9■□□□□ 0.3
HTRA3P83110 RN7SL838P-201ENST00000481676 295 ntBASIC16.9■□□□□ 0.3
HTRA3P83110 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC16.9■□□□□ 0.3
HTRA3P83110 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.9■□□□□ 0.3
HTRA3P83110 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.9■□□□□ 0.3
HTRA3P83110 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.9■□□□□ 0.3
HTRA3P83110 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC16.9■□□□□ 0.3
HTRA3P83110 AC010531.8-201ENST00000623341 685 ntBASIC16.9■□□□□ 0.3
HTRA3P83110 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.9■□□□□ 0.3
HTRA3P83110 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.9■□□□□ 0.3
HTRA3P83110 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.9■□□□□ 0.3
HTRA3P83110 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTRA3P83110 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HTRA3P83110 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTRA3P83110 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
HTRA3P83110 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.89■□□□□ 0.29
HTRA3P83110 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HTRA3P83110 BRD7P5-201ENST00000299197 1822 ntBASIC16.89■□□□□ 0.29
HTRA3P83110 AC138761.6-201ENST00000583997 1423 ntBASIC16.89■□□□□ 0.29
HTRA3P83110 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HTRA3P83110 AGGF1P1-201ENST00000509500 2073 ntBASIC16.89■□□□□ 0.29
HTRA3P83110 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.89■□□□□ 0.29
HTRA3P83110 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HTRA3P83110 PSAT1P2-201ENST00000426107 972 ntBASIC16.89■□□□□ 0.29
HTRA3P83110 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 EEF1GP8-201ENST00000506566 1154 ntBASIC16.89■□□□□ 0.29
HTRA3P83110 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HTRA3P83110 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HTRA3P83110 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.89■□□□□ 0.29
HTRA3P83110 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTRA3P83110 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.88■□□□□ 0.29
HTRA3P83110 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.88■□□□□ 0.29
HTRA3P83110 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HTRA3P83110 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HTRA3P83110 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.88■□□□□ 0.29
HTRA3P83110 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.88■□□□□ 0.29
HTRA3P83110 OR52M2P-201ENST00000414298 959 ntBASIC16.88■□□□□ 0.29
HTRA3P83110 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.88■□□□□ 0.29
HTRA3P83110 RNF7-205ENST00000480908 782 ntTSL 4 BASIC16.88■□□□□ 0.29
HTRA3P83110 RN7SL87P-201ENST00000497657 288 ntBASIC16.88■□□□□ 0.29
HTRA3P83110 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC16.88■□□□□ 0.29
HTRA3P83110 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.88■□□□□ 0.29
HTRA3P83110 ABCC6P1-203ENST00000565566 1170 ntBASIC16.88■□□□□ 0.29
HTRA3P83110 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC16.88■□□□□ 0.29
HTRA3P83110 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.88■□□□□ 0.29
HTRA3P83110 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC16.88■□□□□ 0.29
HTRA3P83110 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC16.88■□□□□ 0.29
HTRA3P83110 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 AC124067.4-201ENST00000519691 2379 ntBASIC16.88■□□□□ 0.29
HTRA3P83110 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms