Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC084121.3-201ENST00000641716 218 ntBASIC16.9■□□□□ 0.3
TPM4P67936 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM4P67936 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM4P67936 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TPM4P67936 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TPM4P67936 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TPM4P67936 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 AL627223.1-201ENST00000416693 442 ntBASIC16.89■□□□□ 0.29
TPM4P67936 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 FAM58DP-201ENST00000428076 619 ntBASIC16.89■□□□□ 0.29
TPM4P67936 RPL13P2-201ENST00000440687 659 ntBASIC16.89■□□□□ 0.29
TPM4P67936 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.89■□□□□ 0.29
TPM4P67936 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 ELL2P1-201ENST00000413990 1906 ntBASIC16.89■□□□□ 0.29
TPM4P67936 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM4P67936 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM4P67936 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM4P67936 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TPM4P67936 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 KRT8P22-201ENST00000562317 1415 ntBASIC16.88■□□□□ 0.29
TPM4P67936 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TPM4P67936 AC004832.2-201ENST00000426397 482 ntBASIC16.88■□□□□ 0.29
TPM4P67936 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM4P67936 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM4P67936 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.88■□□□□ 0.29
TPM4P67936 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.88■□□□□ 0.29
TPM4P67936 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.88■□□□□ 0.29
TPM4P67936 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.88■□□□□ 0.29
TPM4P67936 MIR6080-201ENST00000617359 66 ntBASIC16.88■□□□□ 0.29
TPM4P67936 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM4P67936 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TPM4P67936 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms