Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
SEC61A1P61619 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.25□□□□□ -0.29
SEC61A1P61619 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SEC61A1P61619 FO393414.2-201ENST00000405153 598 ntBASIC13.25□□□□□ -0.29
SEC61A1P61619 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.25□□□□□ -0.29
SEC61A1P61619 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.25□□□□□ -0.29
SEC61A1P61619 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.25□□□□□ -0.29
SEC61A1P61619 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.25□□□□□ -0.29
SEC61A1P61619 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.25□□□□□ -0.29
SEC61A1P61619 SPDYE22P-201ENST00000582158 798 ntBASIC13.25□□□□□ -0.29
SEC61A1P61619 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.25□□□□□ -0.29
SEC61A1P61619 SRD5A3P1-201ENST00000603021 949 ntBASIC13.25□□□□□ -0.29
SEC61A1P61619 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 AC023024.2-201ENST00000623561 1993 ntBASIC13.25□□□□□ -0.29
SEC61A1P61619 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.25□□□□□ -0.29
SEC61A1P61619 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SEC61A1P61619 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SEC61A1P61619 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.24□□□□□ -0.29
SEC61A1P61619 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SEC61A1P61619 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.24□□□□□ -0.29
SEC61A1P61619 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.24□□□□□ -0.29
SEC61A1P61619 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.24□□□□□ -0.29
SEC61A1P61619 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.24□□□□□ -0.29
SEC61A1P61619 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SEC61A1P61619 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.24□□□□□ -0.29
SEC61A1P61619 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.24□□□□□ -0.29
SEC61A1P61619 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.24□□□□□ -0.29
SEC61A1P61619 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.24□□□□□ -0.29
SEC61A1P61619 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms