Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 COX20P2-201ENST00000452636 358 ntBASIC14.19□□□□□ -0.14
RPS3AP61247 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.19□□□□□ -0.14
RPS3AP61247 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 SLED1-202ENST00000512051 380 ntBASIC14.19□□□□□ -0.14
RPS3AP61247 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.19□□□□□ -0.14
RPS3AP61247 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RPS3AP61247 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.19□□□□□ -0.14
RPS3AP61247 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.19□□□□□ -0.14
RPS3AP61247 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 AL358472.5-202ENST00000641448 1267 ntBASIC14.19□□□□□ -0.14
RPS3AP61247 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPS3AP61247 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RPS3AP61247 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.19□□□□□ -0.14
RPS3AP61247 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.19□□□□□ -0.14
RPS3AP61247 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPS3AP61247 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RPS3AP61247 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RPS3AP61247 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 AC127383.1-201ENST00000444697 1800 ntBASIC14.18□□□□□ -0.14
RPS3AP61247 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.18□□□□□ -0.14
RPS3AP61247 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.18□□□□□ -0.14
RPS3AP61247 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.18□□□□□ -0.14
RPS3AP61247 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.18□□□□□ -0.14
RPS3AP61247 AC015922.1-201ENST00000421102 1152 ntBASIC14.18□□□□□ -0.14
RPS3AP61247 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.18□□□□□ -0.14
RPS3AP61247 GNAQP1-201ENST00000444815 1067 ntBASIC14.18□□□□□ -0.14
RPS3AP61247 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 CRB3P1-201ENST00000449338 276 ntBASIC14.18□□□□□ -0.14
RPS3AP61247 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.18□□□□□ -0.14
RPS3AP61247 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.18□□□□□ -0.14
RPS3AP61247 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.18□□□□□ -0.14
RPS3AP61247 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.18□□□□□ -0.14
RPS3AP61247 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.18□□□□□ -0.14
RPS3AP61247 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.18□□□□□ -0.14
RPS3AP61247 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.18□□□□□ -0.14
RPS3AP61247 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RPS3AP61247 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.18□□□□□ -0.14
RPS3AP61247 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.18□□□□□ -0.14
RPS3AP61247 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPS3AP61247 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RPS3AP61247 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.17□□□□□ -0.14
RPS3AP61247 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPS3AP61247 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms