Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB5BP61020 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
RAB5BP61020 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
RAB5BP61020 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 TSPY14P-201ENST00000303979 915 ntBASIC11.74□□□□□ -0.53
RAB5BP61020 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
RAB5BP61020 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
RAB5BP61020 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 NUS1P1-201ENST00000446295 882 ntBASIC11.74□□□□□ -0.53
RAB5BP61020 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC11.74□□□□□ -0.53
RAB5BP61020 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
RAB5BP61020 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB5BP61020 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB5BP61020 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 CSPG4P12-201ENST00000558282 4853 ntBASIC11.74□□□□□ -0.53
RAB5BP61020 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB5BP61020 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RAB5BP61020 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB5BP61020 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 AL358933.1-201ENST00000565046 2830 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RAB5BP61020 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 PEX7-202ENST00000367756 680 ntTSL 3 BASIC11.73□□□□□ -0.53
RAB5BP61020 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.73□□□□□ -0.53
RAB5BP61020 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 CD99P1-205ENST00000527459 561 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 EGLN1P1-201ENST00000531623 762 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 AC072061.1-201ENST00000569710 2234 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 MIR4651-201ENST00000582622 73 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 CYP2A7P1-201ENST00000595391 815 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB5BP61020 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.73□□□□□ -0.53
RAB5BP61020 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RAB5BP61020 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 AC079602.3-201ENST00000623931 403 ntBASIC11.73□□□□□ -0.53
RAB5BP61020 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RAB5BP61020 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RAB5BP61020 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms