Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
SPCS3P61009 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.31□□□□□ -0.44
SPCS3P61009 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SPCS3P61009 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 PEG13-201ENST00000631594 5667 ntBASIC12.31□□□□□ -0.44
SPCS3P61009 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SPCS3P61009 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 ALG1L5P-201ENST00000482043 771 ntBASIC12.31□□□□□ -0.44
SPCS3P61009 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.31□□□□□ -0.44
SPCS3P61009 KRT18P58-201ENST00000527480 1120 ntBASIC12.31□□□□□ -0.44
SPCS3P61009 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.31□□□□□ -0.44
SPCS3P61009 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 AC005829.1-201ENST00000570002 483 ntBASIC12.31□□□□□ -0.44
SPCS3P61009 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.31□□□□□ -0.44
SPCS3P61009 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
SPCS3P61009 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.31□□□□□ -0.44
SPCS3P61009 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.31□□□□□ -0.44
SPCS3P61009 AL589739.1-201ENST00000607720 493 ntBASIC12.31□□□□□ -0.44
SPCS3P61009 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 AL033527.5-202ENST00000641632 1098 ntBASIC12.31□□□□□ -0.44
SPCS3P61009 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.31□□□□□ -0.44
SPCS3P61009 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
SPCS3P61009 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.31□□□□□ -0.44
SPCS3P61009 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SPCS3P61009 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.31□□□□□ -0.44
SPCS3P61009 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.31□□□□□ -0.44
SPCS3P61009 LILRP1-201ENST00000444199 1370 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 CETN4P-206ENST00000642099 2168 ntBASIC12.3□□□□□ -0.44
SPCS3P61009 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SPCS3P61009 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.3□□□□□ -0.44
SPCS3P61009 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
SPCS3P61009 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.3□□□□□ -0.44
SPCS3P61009 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SPCS3P61009 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms