Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC42P60953 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC42P60953 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 AL359183.1-201ENST00000623796 2132 ntBASIC13.79□□□□□ -0.2
CDC42P60953 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC42P60953 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDC42P60953 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC42P60953 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CDC42P60953 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.79□□□□□ -0.2
CDC42P60953 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC42P60953 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC42P60953 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42P60953 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CDC42P60953 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDC42P60953 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDC42P60953 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 YBX2P1-201ENST00000394192 760 ntBASIC13.78□□□□□ -0.2
CDC42P60953 MTND6P24-201ENST00000440466 518 ntBASIC13.78□□□□□ -0.2
CDC42P60953 SERBP1P3-201ENST00000459980 809 ntBASIC13.78□□□□□ -0.2
CDC42P60953 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.78□□□□□ -0.2
CDC42P60953 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.78□□□□□ -0.2
CDC42P60953 AC007967.4-201ENST00000614700 386 ntBASIC13.78□□□□□ -0.2
CDC42P60953 FAM197Y3-203ENST00000618346 717 ntBASIC13.78□□□□□ -0.2
CDC42P60953 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDC42P60953 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 KRT8P24-201ENST00000560290 1559 ntBASIC13.78□□□□□ -0.2
CDC42P60953 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CDC42P60953 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
CDC42P60953 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC42P60953 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC42P60953 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC42P60953 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CDC42P60953 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42P60953 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDC42P60953 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
CDC42P60953 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDC42P60953 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
CDC42P60953 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CDC42P60953 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDC42P60953 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
CDC42P60953 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDC42P60953 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CDC42P60953 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDC42P60953 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CDC42P60953 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.77□□□□□ -0.2
CDC42P60953 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDC42P60953 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CDC42P60953 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms