Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PMS1P54277 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.49■□□□□ 0.23
PMS1P54277 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PMS1P54277 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.49■□□□□ 0.23
PMS1P54277 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PMS1P54277 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PMS1P54277 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.49■□□□□ 0.23
PMS1P54277 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PMS1P54277 DGCR5-201ENST00000399539 862 ntBASIC16.49■□□□□ 0.23
PMS1P54277 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.49■□□□□ 0.23
PMS1P54277 FO681548.1-201ENST00000455617 1132 ntBASIC16.49■□□□□ 0.23
PMS1P54277 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PMS1P54277 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 AC022137.2-201ENST00000503482 481 ntBASIC16.49■□□□□ 0.23
PMS1P54277 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PMS1P54277 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 ENPP7P5-201ENST00000541031 1031 ntBASIC16.49■□□□□ 0.23
PMS1P54277 AP001063.1-201ENST00000568332 529 ntBASIC16.49■□□□□ 0.23
PMS1P54277 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PMS1P54277 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PMS1P54277 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.49■□□□□ 0.23
PMS1P54277 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 KRT8P35-201ENST00000483942 1338 ntBASIC16.48■□□□□ 0.23
PMS1P54277 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 INE2-201ENST00000630399 1874 ntBASIC16.48■□□□□ 0.23
PMS1P54277 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 RN7SKP230-201ENST00000365642 335 ntBASIC16.48■□□□□ 0.23
PMS1P54277 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.48■□□□□ 0.23
PMS1P54277 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 AC140912.1-201ENST00000577171 1054 ntBASIC16.48■□□□□ 0.23
PMS1P54277 MIR4745-201ENST00000577608 62 ntBASIC16.48■□□□□ 0.23
PMS1P54277 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.48■□□□□ 0.23
PMS1P54277 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 CICP4-201ENST00000447359 2812 ntBASIC16.48■□□□□ 0.23
PMS1P54277 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.48■□□□□ 0.23
PMS1P54277 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.48■□□□□ 0.23
PMS1P54277 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PMS1P54277 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.48■□□□□ 0.23
PMS1P54277 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PMS1P54277 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.47■□□□□ 0.23
PMS1P54277 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.47■□□□□ 0.23
PMS1P54277 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PMS1P54277 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PMS1P54277 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PMS1P54277 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PMS1P54277 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms