Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.39■□□□□ 0.21
CLCN3P51790 AC013355.1-201ENST00000562625 723 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.39■□□□□ 0.21
CLCN3P51790 AC005324.6-201ENST00000587972 613 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN3P51790 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.39■□□□□ 0.21
CLCN3P51790 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.39■□□□□ 0.21
CLCN3P51790 AC068587.10-201ENST00000641210 219 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLCN3P51790 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN3P51790 LINC01101-201ENST00000622953 1884 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN3P51790 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CLCN3P51790 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 CICP12-201ENST00000455801 843 ntBASIC16.38■□□□□ 0.21
CLCN3P51790 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 RPL18P13-201ENST00000478088 569 ntBASIC16.38■□□□□ 0.21
CLCN3P51790 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.38■□□□□ 0.21
CLCN3P51790 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN3P51790 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 RN7SL163P-201ENST00000583100 276 ntBASIC16.38■□□□□ 0.21
CLCN3P51790 AL645939.5-201ENST00000606834 243 ntBASIC16.38■□□□□ 0.21
CLCN3P51790 BX088702.1-201ENST00000610784 235 ntBASIC16.38■□□□□ 0.21
CLCN3P51790 AC068587.8-201ENST00000641239 219 ntBASIC16.38■□□□□ 0.21
CLCN3P51790 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLCN3P51790 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN3P51790 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCN3P51790 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN3P51790 AP002414.2-201ENST00000591780 3365 ntBASIC16.37■□□□□ 0.21
CLCN3P51790 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLCN3P51790 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
CLCN3P51790 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN3P51790 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLCN3P51790 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLCN3P51790 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN3P51790 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CLCN3P51790 ALG3P1-201ENST00000508806 1114 ntBASIC16.37■□□□□ 0.21
CLCN3P51790 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.37■□□□□ 0.21
CLCN3P51790 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.37■□□□□ 0.21
CLCN3P51790 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.37■□□□□ 0.21
CLCN3P51790 AC008825.2-201ENST00000603374 718 ntBASIC16.37■□□□□ 0.21
CLCN3P51790 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN3P51790 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN3P51790 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN3P51790 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms