Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.45■□□□□ 0.22
CENPFP49454 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC16.45■□□□□ 0.22
CENPFP49454 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 AC013553.1-201ENST00000560906 267 ntBASIC16.45■□□□□ 0.22
CENPFP49454 NAV1-210ENST00000593583 726 ntBASIC16.45■□□□□ 0.22
CENPFP49454 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.44■□□□□ 0.22
CENPFP49454 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.44■□□□□ 0.22
CENPFP49454 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.44■□□□□ 0.22
CENPFP49454 BPIFB5P-201ENST00000457066 1099 ntBASIC16.44■□□□□ 0.22
CENPFP49454 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.44■□□□□ 0.22
CENPFP49454 IGHEP2-201ENST00000519308 1256 ntBASIC16.44■□□□□ 0.22
CENPFP49454 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.44■□□□□ 0.22
CENPFP49454 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.44■□□□□ 0.22
CENPFP49454 AC027601.3-201ENST00000622907 509 ntBASIC16.44■□□□□ 0.22
CENPFP49454 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.44■□□□□ 0.22
CENPFP49454 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.44■□□□□ 0.22
CENPFP49454 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CENPFP49454 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.44■□□□□ 0.22
CENPFP49454 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CENPFP49454 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.44■□□□□ 0.22
CENPFP49454 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 GUSBP10-201ENST00000417412 665 ntBASIC16.44■□□□□ 0.22
CENPFP49454 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.44■□□□□ 0.22
CENPFP49454 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.44■□□□□ 0.22
CENPFP49454 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.44■□□□□ 0.22
CENPFP49454 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CENPFP49454 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CENPFP49454 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.44■□□□□ 0.22
CENPFP49454 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 SALL4P5-201ENST00000419001 1760 ntBASIC16.44■□□□□ 0.22
CENPFP49454 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 AC067931.2-201ENST00000623655 2003 ntBASIC16.44■□□□□ 0.22
CENPFP49454 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.44■□□□□ 0.22
CENPFP49454 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CENPFP49454 RPL3P5-201ENST00000441645 1232 ntBASIC16.43■□□□□ 0.22
CENPFP49454 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 AC023906.1-201ENST00000486386 453 ntBASIC16.43■□□□□ 0.22
CENPFP49454 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.43■□□□□ 0.22
CENPFP49454 AC113347.2-201ENST00000512350 279 ntBASIC16.43■□□□□ 0.22
CENPFP49454 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CENPFP49454 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.43■□□□□ 0.22
CENPFP49454 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 MIR6746-201ENST00000620971 63 ntBASIC16.43■□□□□ 0.22
CENPFP49454 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 ZBED1P1-201ENST00000502364 1930 ntBASIC16.43■□□□□ 0.22
CENPFP49454 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 AC003686.1-201ENST00000550956 1034 ntBASIC16.43■□□□□ 0.22
CENPFP49454 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.43■□□□□ 0.22
CENPFP49454 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.43■□□□□ 0.22
CENPFP49454 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 AL137077.2-201ENST00000635124 1608 ntBASIC16.43■□□□□ 0.22
CENPFP49454 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 AF274858.1-201ENST00000406288 372 ntBASIC16.43■□□□□ 0.22
CENPFP49454 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.43■□□□□ 0.22
CENPFP49454 AP000322.3-201ENST00000608665 388 ntBASIC16.43■□□□□ 0.22
CENPFP49454 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.43■□□□□ 0.22
CENPFP49454 AC139712.1-201ENST00000378256 1875 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms