Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC140878.1-201ENST00000565277 250 ntBASIC13.74□□□□□ -0.21
CENPAP49450 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.74□□□□□ -0.21
CENPAP49450 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.74□□□□□ -0.21
CENPAP49450 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ACE3P-201ENST00000423435 1973 ntBASIC13.74□□□□□ -0.21
CENPAP49450 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CENPAP49450 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 SNX18-202ENST00000343017 3140 ntBASIC13.73□□□□□ -0.21
CENPAP49450 AC107918.4-201ENST00000641966 3141 ntBASIC13.73□□□□□ -0.21
CENPAP49450 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.73□□□□□ -0.21
CENPAP49450 MIR943-201ENST00000401286 94 ntBASIC13.73□□□□□ -0.21
CENPAP49450 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.73□□□□□ -0.21
CENPAP49450 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.73□□□□□ -0.21
CENPAP49450 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.73□□□□□ -0.21
CENPAP49450 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.73□□□□□ -0.21
CENPAP49450 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.73□□□□□ -0.21
CENPAP49450 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CENPAP49450 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.73□□□□□ -0.21
CENPAP49450 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.73□□□□□ -0.21
CENPAP49450 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 AC117489.1-201ENST00000625169 3217 ntBASIC13.73□□□□□ -0.21
CENPAP49450 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
CENPAP49450 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CENPAP49450 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.72□□□□□ -0.21
CENPAP49450 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.72□□□□□ -0.21
CENPAP49450 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 AP000845.1-201ENST00000581677 2131 ntBASIC13.72□□□□□ -0.21
CENPAP49450 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.72□□□□□ -0.21
CENPAP49450 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.72□□□□□ -0.21
CENPAP49450 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.72□□□□□ -0.21
CENPAP49450 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 474.1 ms