Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRPC1P48995 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRPC1P48995 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRPC1P48995 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRPC1P48995 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRPC1P48995 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRPC1P48995 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRPC1P48995 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRPC1P48995 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.07
TRPC1P48995 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
TRPC1P48995 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.58□□□□□ -0.07
TRPC1P48995 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRPC1P48995 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.58□□□□□ -0.08
TRPC1P48995 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.58□□□□□ -0.08
TRPC1P48995 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.58□□□□□ -0.08
TRPC1P48995 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRPC1P48995 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.58□□□□□ -0.08
TRPC1P48995 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 AL512361.1-201ENST00000554200 418 ntBASIC14.58□□□□□ -0.08
TRPC1P48995 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.58□□□□□ -0.08
TRPC1P48995 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.58□□□□□ -0.08
TRPC1P48995 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRPC1P48995 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TRPC1P48995 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRPC1P48995 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRPC1P48995 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRPC1P48995 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.57□□□□□ -0.08
TRPC1P48995 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRPC1P48995 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.57□□□□□ -0.08
TRPC1P48995 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRPC1P48995 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 AC009477.1-201ENST00000452936 217 ntBASIC14.57□□□□□ -0.08
TRPC1P48995 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.57□□□□□ -0.08
TRPC1P48995 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.57□□□□□ -0.08
TRPC1P48995 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.57□□□□□ -0.08
TRPC1P48995 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.57□□□□□ -0.08
TRPC1P48995 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.57□□□□□ -0.08
TRPC1P48995 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 AC004233.3-201ENST00000607794 1269 ntBASIC14.57□□□□□ -0.08
TRPC1P48995 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.57□□□□□ -0.08
TRPC1P48995 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.57□□□□□ -0.08
TRPC1P48995 AF228730.6-201ENST00000641497 218 ntBASIC14.57□□□□□ -0.08
TRPC1P48995 AC084121.3-201ENST00000641716 218 ntBASIC14.57□□□□□ -0.08
TRPC1P48995 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TRPC1P48995 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.57□□□□□ -0.08
TRPC1P48995 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.57□□□□□ -0.08
TRPC1P48995 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRPC1P48995 AC138969.3-201ENST00000546612 1459 ntBASIC14.57□□□□□ -0.08
TRPC1P48995 AC138932.2-201ENST00000548268 1459 ntBASIC14.57□□□□□ -0.08
TRPC1P48995 AC126755.4-201ENST00000549796 1459 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms