Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NR4A2P43354 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.76□□□□□ -0.21
NR4A2P43354 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.76□□□□□ -0.21
NR4A2P43354 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.76□□□□□ -0.21
NR4A2P43354 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.76□□□□□ -0.21
NR4A2P43354 AC093724.1-201ENST00000448659 1027 ntBASIC13.76□□□□□ -0.21
NR4A2P43354 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.76□□□□□ -0.21
NR4A2P43354 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 AC004233.3-201ENST00000607794 1269 ntBASIC13.76□□□□□ -0.21
NR4A2P43354 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.76□□□□□ -0.21
NR4A2P43354 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NR4A2P43354 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NR4A2P43354 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NR4A2P43354 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR4A2P43354 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.76□□□□□ -0.21
NR4A2P43354 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.75□□□□□ -0.21
NR4A2P43354 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NR4A2P43354 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 CETN4P-206ENST00000642099 2168 ntBASIC13.75□□□□□ -0.21
NR4A2P43354 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 AC011474.4-201ENST00000623523 2076 ntBASIC13.75□□□□□ -0.21
NR4A2P43354 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.75□□□□□ -0.21
NR4A2P43354 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 MTND6P24-201ENST00000440466 518 ntBASIC13.75□□□□□ -0.21
NR4A2P43354 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NR4A2P43354 GAPDHP21-201ENST00000450301 1010 ntBASIC13.75□□□□□ -0.21
NR4A2P43354 RNA5SP410-201ENST00000516285 106 ntBASIC13.75□□□□□ -0.21
NR4A2P43354 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.75□□□□□ -0.21
NR4A2P43354 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.75□□□□□ -0.21
NR4A2P43354 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NR4A2P43354 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
NR4A2P43354 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 AC127383.1-201ENST00000444697 1800 ntBASIC13.75□□□□□ -0.21
NR4A2P43354 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A2P43354 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NR4A2P43354 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms