Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 FLJ16779-201ENST00000612722 7638 ntBASIC17.15■□□□□ 0.34
CLCN1P35523 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCN1P35523 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CLCN1P35523 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CLCN1P35523 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CLCN1P35523 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC17.14■□□□□ 0.34
CLCN1P35523 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN1P35523 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN1P35523 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CLCN1P35523 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CLCN1P35523 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLCN1P35523 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CLCN1P35523 KRT18P32-201ENST00000424695 1287 ntBASIC17.14■□□□□ 0.33
CLCN1P35523 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCN1P35523 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.14■□□□□ 0.33
CLCN1P35523 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC17.14■□□□□ 0.33
CLCN1P35523 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN1P35523 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.14■□□□□ 0.33
CLCN1P35523 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCN1P35523 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCN1P35523 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC17.14■□□□□ 0.33
CLCN1P35523 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN1P35523 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLCN1P35523 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 CYP4F24P-201ENST00000586049 1580 ntBASIC17.14■□□□□ 0.33
CLCN1P35523 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCN1P35523 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CLCN1P35523 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCN1P35523 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN1P35523 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCN1P35523 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN1P35523 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLCN1P35523 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCN1P35523 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCN1P35523 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.13■□□□□ 0.33
CLCN1P35523 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN1P35523 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN1P35523 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCN1P35523 AC092865.5-201ENST00000545435 363 ntBASIC17.13■□□□□ 0.33
CLCN1P35523 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCN1P35523 BANF1P1-201ENST00000553684 263 ntBASIC17.13■□□□□ 0.33
CLCN1P35523 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCN1P35523 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCN1P35523 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCN1P35523 AC067750.1-201ENST00000608826 6545 ntBASIC17.13■□□□□ 0.33
CLCN1P35523 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLCN1P35523 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN1P35523 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN1P35523 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms