Protein–RNA interactions for Protein: P26583

HMGB2, High mobility group protein B2, humanhuman

Known RBP Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2P26583 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 LINC00265-2P-201ENST00000413372 782 ntBASIC18.53■□□□□ 0.56
HMGB2P26583 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.53■□□□□ 0.56
HMGB2P26583 RN7SL494P-201ENST00000461517 304 ntBASIC18.53■□□□□ 0.56
HMGB2P26583 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.53■□□□□ 0.56
HMGB2P26583 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HMGB2P26583 AC006548.2-201ENST00000605217 529 ntBASIC18.53■□□□□ 0.56
HMGB2P26583 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGB2P26583 AC090386.2-201ENST00000623010 1039 ntBASIC18.53■□□□□ 0.56
HMGB2P26583 LINC00244-201ENST00000625073 613 ntBASIC18.53■□□□□ 0.56
HMGB2P26583 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.53■□□□□ 0.56
HMGB2P26583 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HMGB2P26583 AC092135.3-201ENST00000624151 1846 ntBASIC18.53■□□□□ 0.56
HMGB2P26583 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGB2P26583 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGB2P26583 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGB2P26583 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGB2P26583 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HMGB2P26583 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGB2P26583 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
HMGB2P26583 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGB2P26583 AL672207.1-201ENST00000328462 1570 ntBASIC18.52■□□□□ 0.56
HMGB2P26583 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGB2P26583 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGB2P26583 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 AC244197.1-201ENST00000456494 951 ntBASIC18.52■□□□□ 0.56
HMGB2P26583 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.52■□□□□ 0.56
HMGB2P26583 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
HMGB2P26583 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGB2P26583 AC068831.5-201ENST00000557387 328 ntBASIC18.52■□□□□ 0.56
HMGB2P26583 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGB2P26583 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.52■□□□□ 0.56
HMGB2P26583 AC021016.3-201ENST00000608367 477 ntBASIC18.52■□□□□ 0.56
HMGB2P26583 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.52■□□□□ 0.56
HMGB2P26583 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGB2P26583 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGB2P26583 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
HMGB2P26583 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGB2P26583 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.51■□□□□ 0.55
HMGB2P26583 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGB2P26583 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HMGB2P26583 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HMGB2P26583 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 COX20P1-201ENST00000366529 357 ntBASIC18.51■□□□□ 0.55
HMGB2P26583 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGB2P26583 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.51■□□□□ 0.55
HMGB2P26583 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.51■□□□□ 0.55
HMGB2P26583 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.51■□□□□ 0.55
HMGB2P26583 RN7SL396P-201ENST00000471086 295 ntBASIC18.51■□□□□ 0.55
HMGB2P26583 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.51■□□□□ 0.55
HMGB2P26583 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.51■□□□□ 0.55
HMGB2P26583 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.51■□□□□ 0.55
HMGB2P26583 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGB2P26583 AC006483.2-201ENST00000609813 515 ntBASIC18.51■□□□□ 0.55
HMGB2P26583 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HMGB2P26583 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.51■□□□□ 0.55
HMGB2P26583 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGB2P26583 MROH4P-201ENST00000431302 1578 ntBASIC18.51■□□□□ 0.55
HMGB2P26583 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGB2P26583 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGB2P26583 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGB2P26583 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGB2P26583 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms