Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
RAB4AP20338 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 AC127383.1-201ENST00000444697 1800 ntBASIC11.59□□□□□ -0.55
RAB4AP20338 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
RAB4AP20338 RNU1-129P-201ENST00000384064 167 ntBASIC11.59□□□□□ -0.55
RAB4AP20338 AL031133.1-201ENST00000406807 723 ntBASIC11.59□□□□□ -0.55
RAB4AP20338 ELK2BP-201ENST00000415014 1224 ntBASIC11.59□□□□□ -0.55
RAB4AP20338 AC004945.1-201ENST00000416738 983 ntBASIC11.59□□□□□ -0.55
RAB4AP20338 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.59□□□□□ -0.55
RAB4AP20338 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.59□□□□□ -0.55
RAB4AP20338 AP002469.2-201ENST00000531724 424 ntBASIC11.59□□□□□ -0.55
RAB4AP20338 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.59□□□□□ -0.55
RAB4AP20338 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.59□□□□□ -0.55
RAB4AP20338 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 U1.21-201ENST00000580816 167 ntBASIC11.59□□□□□ -0.55
RAB4AP20338 MIR4321-201ENST00000592276 80 ntBASIC11.59□□□□□ -0.55
RAB4AP20338 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
RAB4AP20338 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.59□□□□□ -0.55
RAB4AP20338 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RAB4AP20338 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RAB4AP20338 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.59□□□□□ -0.55
RAB4AP20338 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RAB4AP20338 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
RAB4AP20338 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.58□□□□□ -0.55
RAB4AP20338 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB4AP20338 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
RAB4AP20338 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RAB4AP20338 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
RAB4AP20338 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.58□□□□□ -0.56
RAB4AP20338 PMS2P4-201ENST00000412466 1052 ntBASIC11.58□□□□□ -0.56
RAB4AP20338 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.58□□□□□ -0.56
RAB4AP20338 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.58□□□□□ -0.56
RAB4AP20338 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.58□□□□□ -0.56
RAB4AP20338 MIR3909-201ENST00000579518 119 ntBASIC11.58□□□□□ -0.56
RAB4AP20338 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.58□□□□□ -0.56
RAB4AP20338 MIR4515-201ENST00000584082 81 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms