Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB3BP20337 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RAB3BP20337 AC099521.3-201ENST00000624251 2938 ntBASIC13.22□□□□□ -0.29
RAB3BP20337 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB3BP20337 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 MRPL3P1-201ENST00000400109 1033 ntBASIC13.22□□□□□ -0.29
RAB3BP20337 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB3BP20337 FAAHP1-202ENST00000446499 1238 ntBASIC13.22□□□□□ -0.29
RAB3BP20337 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB3BP20337 TMEM198B-204ENST00000484016 896 ntBASIC13.22□□□□□ -0.29
RAB3BP20337 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB3BP20337 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB3BP20337 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB3BP20337 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
RAB3BP20337 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB3BP20337 AC104692.2-201ENST00000603054 253 ntBASIC13.22□□□□□ -0.29
RAB3BP20337 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 AC092902.6-201ENST00000641783 218 ntBASIC13.22□□□□□ -0.29
RAB3BP20337 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAB3BP20337 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB3BP20337 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
RAB3BP20337 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB3BP20337 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB3BP20337 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.22□□□□□ -0.29
RAB3BP20337 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
RAB3BP20337 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB3BP20337 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB3BP20337 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB3BP20337 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 AL360270.3-201ENST00000609118 1348 ntBASIC13.21□□□□□ -0.29
RAB3BP20337 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
RAB3BP20337 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB3BP20337 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB3BP20337 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB3BP20337 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB3BP20337 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RAB3BP20337 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB3BP20337 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 KRT18P64-201ENST00000434946 1219 ntBASIC13.21□□□□□ -0.29
RAB3BP20337 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB3BP20337 KRT18P43-201ENST00000469825 1281 ntBASIC13.21□□□□□ -0.29
RAB3BP20337 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB3BP20337 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB3BP20337 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB3BP20337 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB3BP20337 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB3BP20337 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.21□□□□□ -0.29
RAB3BP20337 AC074044.1-201ENST00000609673 707 ntBASIC13.21□□□□□ -0.29
RAB3BP20337 AC055717.3-201ENST00000622967 595 ntBASIC13.21□□□□□ -0.29
RAB3BP20337 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB3BP20337 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB3BP20337 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.21□□□□□ -0.3
RAB3BP20337 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB3BP20337 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.21□□□□□ -0.3
RAB3BP20337 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB3BP20337 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms