Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.15■□□□□ 0.18
CD58P19256 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.15■□□□□ 0.18
CD58P19256 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD58P19256 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CD58P19256 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD58P19256 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD58P19256 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CD58P19256 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD58P19256 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.15■□□□□ 0.18
CD58P19256 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CD58P19256 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD58P19256 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD58P19256 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CD58P19256 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CD58P19256 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
CD58P19256 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.14■□□□□ 0.18
CD58P19256 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CD58P19256 AC023908.3-201ENST00000564211 3047 ntBASIC16.14■□□□□ 0.17
CD58P19256 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.14■□□□□ 0.17
CD58P19256 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.14■□□□□ 0.17
CD58P19256 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 KRT43P-201ENST00000434019 910 ntBASIC16.14■□□□□ 0.17
CD58P19256 C2orf27AP3-201ENST00000434123 579 ntBASIC16.14■□□□□ 0.17
CD58P19256 U91328.1-201ENST00000437528 223 ntBASIC16.14■□□□□ 0.17
CD58P19256 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.14■□□□□ 0.17
CD58P19256 KRT17P8-201ENST00000540749 863 ntBASIC16.14■□□□□ 0.17
CD58P19256 AC025279.2-201ENST00000569730 653 ntBASIC16.14■□□□□ 0.17
CD58P19256 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.14■□□□□ 0.17
CD58P19256 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.14■□□□□ 0.17
CD58P19256 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 AL354718.3-201ENST00000616414 581 ntBASIC16.14■□□□□ 0.17
CD58P19256 CR382287.1-201ENST00000623954 586 ntBASIC16.14■□□□□ 0.17
CD58P19256 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 AC015656.1-201ENST00000624209 3578 ntBASIC16.14■□□□□ 0.17
CD58P19256 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CD58P19256 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD58P19256 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.14■□□□□ 0.17
CD58P19256 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.13■□□□□ 0.17
CD58P19256 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.13■□□□□ 0.17
CD58P19256 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.13■□□□□ 0.17
CD58P19256 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 AC112492.5-201ENST00000421897 457 ntBASIC16.13■□□□□ 0.17
CD58P19256 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.13■□□□□ 0.17
CD58P19256 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CD58P19256 AC007551.1-201ENST00000457394 519 ntBASIC16.13■□□□□ 0.17
CD58P19256 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.13■□□□□ 0.17
CD58P19256 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.13■□□□□ 0.17
CD58P19256 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.13■□□□□ 0.17
CD58P19256 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.13■□□□□ 0.17
CD58P19256 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 ECM1P1-201ENST00000604092 1279 ntBASIC16.13■□□□□ 0.17
CD58P19256 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.13■□□□□ 0.17
CD58P19256 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.13■□□□□ 0.17
CD58P19256 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.13■□□□□ 0.17
CD58P19256 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CD58P19256 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.13■□□□□ 0.17
CD58P19256 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms