Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL3L1P16619 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 AC112492.5-201ENST00000421897 457 ntBASIC12.41□□□□□ -0.42
CCL3L1P16619 FAM197Y7-201ENST00000432892 766 ntBASIC12.41□□□□□ -0.42
CCL3L1P16619 AC016694.1-201ENST00000434179 700 ntBASIC12.41□□□□□ -0.42
CCL3L1P16619 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 AC245100.3-201ENST00000441281 285 ntBASIC12.41□□□□□ -0.42
CCL3L1P16619 AC234783.1-201ENST00000441761 496 ntBASIC12.41□□□□□ -0.42
CCL3L1P16619 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
CCL3L1P16619 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CCL3L1P16619 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.41□□□□□ -0.42
CCL3L1P16619 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 ENPP7P14-201ENST00000621765 1040 ntBASIC12.41□□□□□ -0.42
CCL3L1P16619 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL3L1P16619 AC068418.2-201ENST00000577309 3703 ntBASIC12.4□□□□□ -0.42
CCL3L1P16619 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL3L1P16619 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CCL3L1P16619 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL3L1P16619 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
CCL3L1P16619 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CCL3L1P16619 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 TPM3P8-201ENST00000330554 643 ntBASIC12.4□□□□□ -0.42
CCL3L1P16619 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CCL3L1P16619 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.4□□□□□ -0.42
CCL3L1P16619 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.4□□□□□ -0.42
CCL3L1P16619 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL3L1P16619 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.4□□□□□ -0.42
CCL3L1P16619 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CCL3L1P16619 RAB43P1-201ENST00000561790 589 ntBASIC12.4□□□□□ -0.42
CCL3L1P16619 RN7SL48P-201ENST00000579283 293 ntBASIC12.4□□□□□ -0.42
CCL3L1P16619 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 AL162274.1-201ENST00000617191 1098 ntBASIC12.4□□□□□ -0.42
CCL3L1P16619 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL3L1P16619 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CCL3L1P16619 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL3L1P16619 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL3L1P16619 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms