Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.31□□□□□ -0.44
DEFA4P12838 AC018529.2-202ENST00000611482 3087 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.3□□□□□ -0.44
DEFA4P12838 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 Z97205.2-201ENST00000564697 1639 ntBASIC12.3□□□□□ -0.44
DEFA4P12838 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.3□□□□□ -0.44
DEFA4P12838 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.3□□□□□ -0.44
DEFA4P12838 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.3□□□□□ -0.44
DEFA4P12838 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
DEFA4P12838 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
DEFA4P12838 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
DEFA4P12838 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA4P12838 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 AL139400.1-201ENST00000366220 510 ntBASIC12.29□□□□□ -0.44
DEFA4P12838 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA4P12838 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DEFA4P12838 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
DEFA4P12838 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.29□□□□□ -0.44
DEFA4P12838 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.29□□□□□ -0.44
DEFA4P12838 AC015922.1-201ENST00000421102 1152 ntBASIC12.29□□□□□ -0.44
DEFA4P12838 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.29□□□□□ -0.44
DEFA4P12838 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.29□□□□□ -0.44
DEFA4P12838 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.29□□□□□ -0.44
DEFA4P12838 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.29□□□□□ -0.44
DEFA4P12838 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms