Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
UBCP0CG48 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
UBCP0CG48 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.24□□□□□ -0.29
UBCP0CG48 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBCP0CG48 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 AL157414.3-201ENST00000624276 1954 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 BTBD7P1-201ENST00000447253 1453 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
UBCP0CG48 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 AC093525.8-201ENST00000624099 1342 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 AL139400.1-201ENST00000366220 510 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
UBCP0CG48 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.23□□□□□ -0.29
UBCP0CG48 KRT18P13-201ENST00000400056 1290 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.23□□□□□ -0.29
UBCP0CG48 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.23□□□□□ -0.29
UBCP0CG48 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 AC114501.2-201ENST00000439631 535 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 MEIS3P1-201ENST00000495167 958 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 GAPDHP40-201ENST00000505218 1006 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.23□□□□□ -0.29
UBCP0CG48 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.23□□□□□ -0.29
UBCP0CG48 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 AC027601.5-201ENST00000624065 2482 ntBASIC13.23□□□□□ -0.29
UBCP0CG48 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.23□□□□□ -0.29
UBCP0CG48 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.23□□□□□ -0.29
UBCP0CG48 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
UBCP0CG48 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
UBCP0CG48 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBCP0CG48 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms