Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.78■□□□□ 0.12
APOEP02649 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.78■□□□□ 0.12
APOEP02649 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.78■□□□□ 0.12
APOEP02649 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.78■□□□□ 0.12
APOEP02649 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.78■□□□□ 0.12
APOEP02649 AC025279.2-201ENST00000569730 653 ntBASIC15.78■□□□□ 0.12
APOEP02649 AP000845.1-201ENST00000581677 2131 ntBASIC15.78■□□□□ 0.12
APOEP02649 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
APOEP02649 AC017083.2-201ENST00000608069 979 ntBASIC15.78■□□□□ 0.12
APOEP02649 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.78■□□□□ 0.12
APOEP02649 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.78■□□□□ 0.12
APOEP02649 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
APOEP02649 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
APOEP02649 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
APOEP02649 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
APOEP02649 AL359258.3-201ENST00000622910 2331 ntBASIC15.78■□□□□ 0.12
APOEP02649 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.78■□□□□ 0.12
APOEP02649 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
APOEP02649 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
APOEP02649 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
APOEP02649 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.77■□□□□ 0.12
APOEP02649 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.77■□□□□ 0.12
APOEP02649 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 AC232323.1-201ENST00000540724 2099 ntBASIC15.77■□□□□ 0.12
APOEP02649 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
APOEP02649 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.77■□□□□ 0.12
APOEP02649 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.77■□□□□ 0.12
APOEP02649 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.77■□□□□ 0.12
APOEP02649 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 LINC00552-201ENST00000625151 2579 ntBASIC15.77■□□□□ 0.12
APOEP02649 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.77■□□□□ 0.12
APOEP02649 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.77■□□□□ 0.12
APOEP02649 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.77■□□□□ 0.12
APOEP02649 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
APOEP02649 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.77■□□□□ 0.12
APOEP02649 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.77■□□□□ 0.12
APOEP02649 GNRHR2-203ENST00000581100 1187 ntBASIC15.77■□□□□ 0.12
APOEP02649 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.77■□□□□ 0.12
APOEP02649 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.77■□□□□ 0.12
APOEP02649 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
APOEP02649 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.77■□□□□ 0.12
APOEP02649 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
APOEP02649 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
APOEP02649 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
APOEP02649 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.77■□□□□ 0.11
APOEP02649 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
APOEP02649 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
APOEP02649 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
APOEP02649 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
APOEP02649 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
APOEP02649 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
APOEP02649 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
APOEP02649 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.77■□□□□ 0.11
APOEP02649 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.77■□□□□ 0.11
APOEP02649 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.77■□□□□ 0.11
APOEP02649 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
APOEP02649 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.77■□□□□ 0.11
APOEP02649 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
APOEP02649 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
APOEP02649 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.77■□□□□ 0.11
APOEP02649 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
APOEP02649 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
APOEP02649 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
APOEP02649 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.76■□□□□ 0.11
APOEP02649 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.76■□□□□ 0.11
APOEP02649 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
APOEP02649 ARSEP1-201ENST00000420443 635 ntBASIC15.76■□□□□ 0.11
APOEP02649 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.76■□□□□ 0.11
APOEP02649 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.76■□□□□ 0.11
APOEP02649 ATP5G2P4-201ENST00000442175 420 ntBASIC15.76■□□□□ 0.11
APOEP02649 KLF2P4-201ENST00000451959 1225 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms