Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.93□□□□□ -0.5
IFNA1P01562 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.93□□□□□ -0.5
IFNA1P01562 AC025062.2-201ENST00000605477 670 ntBASIC11.93□□□□□ -0.5
IFNA1P01562 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.93□□□□□ -0.5
IFNA1P01562 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.93□□□□□ -0.5
IFNA1P01562 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 Z82170.1-201ENST00000625081 3192 ntBASIC11.93□□□□□ -0.5
IFNA1P01562 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 AL354702.1-201ENST00000442006 1960 ntBASIC11.92□□□□□ -0.5
IFNA1P01562 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 AC005332.1-201ENST00000577698 1310 ntBASIC11.92□□□□□ -0.5
IFNA1P01562 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 AL136982.4-201ENST00000437689 1740 ntBASIC11.92□□□□□ -0.5
IFNA1P01562 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
IFNA1P01562 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
IFNA1P01562 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.92□□□□□ -0.5
IFNA1P01562 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.92□□□□□ -0.5
IFNA1P01562 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.92□□□□□ -0.5
IFNA1P01562 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.92□□□□□ -0.5
IFNA1P01562 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 AC114271.1-201ENST00000612689 2813 ntBASIC11.92□□□□□ -0.5
IFNA1P01562 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 AC023794.5-201ENST00000564380 2157 ntBASIC11.92□□□□□ -0.5
IFNA1P01562 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
IFNA1P01562 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IFNA1P01562 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.92□□□□□ -0.5
IFNA1P01562 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.92□□□□□ -0.5
IFNA1P01562 AC018665.1-201ENST00000622927 1362 ntBASIC11.92□□□□□ -0.5
IFNA1P01562 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.91□□□□□ -0.5
IFNA1P01562 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 AGGF1P1-201ENST00000509500 2073 ntBASIC11.91□□□□□ -0.5
IFNA1P01562 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms