Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX4O95219 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX4O95219 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
SNX4O95219 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX4O95219 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SNX4O95219 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX4O95219 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.22□□□□□ -0.13
SNX4O95219 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SNX4O95219 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.22□□□□□ -0.13
SNX4O95219 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.21□□□□□ -0.13
SNX4O95219 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 AL512384.1-201ENST00000406683 331 ntBASIC14.21□□□□□ -0.13
SNX4O95219 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.21□□□□□ -0.13
SNX4O95219 SOCS2P1-201ENST00000417727 557 ntBASIC14.21□□□□□ -0.13
SNX4O95219 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX4O95219 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.21□□□□□ -0.13
SNX4O95219 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
SNX4O95219 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX4O95219 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.21□□□□□ -0.13
SNX4O95219 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SNX4O95219 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX4O95219 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.21□□□□□ -0.13
SNX4O95219 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.21□□□□□ -0.13
SNX4O95219 AC239800.4-201ENST00000603712 296 ntBASIC14.21□□□□□ -0.13
SNX4O95219 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
SNX4O95219 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 AC136759.1-202ENST00000530858 2194 ntBASIC14.21□□□□□ -0.13
SNX4O95219 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 AC140479.7-201ENST00000636301 2332 ntBASIC14.21□□□□□ -0.13
SNX4O95219 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SNX4O95219 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX4O95219 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX4O95219 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX4O95219 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX4O95219 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNX4O95219 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNX4O95219 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNX4O95219 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNX4O95219 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.21□□□□□ -0.14
SNX4O95219 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SNX4O95219 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
SNX4O95219 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 AC126365.1-201ENST00000578585 1514 ntBASIC14.2□□□□□ -0.14
SNX4O95219 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SNX4O95219 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SNX4O95219 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SNX4O95219 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SNX4O95219 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX4O95219 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
SNX4O95219 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SNX4O95219 RPL5P21-201ENST00000404620 815 ntBASIC14.2□□□□□ -0.14
SNX4O95219 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX4O95219 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
SNX4O95219 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.2□□□□□ -0.14
SNX4O95219 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX4O95219 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX4O95219 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX4O95219 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms