Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 AC004899.1-201ENST00000424687 1714 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 CHMP1AP1-201ENST00000445563 662 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.14■□□□□ 0.17
CSPG5O95196 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.14■□□□□ 0.17
CSPG5O95196 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.14■□□□□ 0.17
CSPG5O95196 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.14■□□□□ 0.17
CSPG5O95196 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.14■□□□□ 0.17
CSPG5O95196 SAMD11P1-201ENST00000571429 661 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 MIR4750-201ENST00000584564 56 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 AL136301.1-201ENST00000615830 422 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 AC022748.3-201ENST00000621828 275 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 AL805961.1-203ENST00000641078 1258 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.14■□□□□ 0.17
CSPG5O95196 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CSPG5O95196 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.14■□□□□ 0.17
CSPG5O95196 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 AC127383.1-201ENST00000444697 1800 ntBASIC16.14■□□□□ 0.17
CSPG5O95196 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.14■□□□□ 0.17
CSPG5O95196 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CSPG5O95196 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CSPG5O95196 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSPG5O95196 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.13■□□□□ 0.17
CSPG5O95196 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.13■□□□□ 0.17
CSPG5O95196 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.13■□□□□ 0.17
CSPG5O95196 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.13■□□□□ 0.17
CSPG5O95196 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 DPM3-202ENST00000368399 517 ntBASIC16.13■□□□□ 0.17
CSPG5O95196 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.13■□□□□ 0.17
CSPG5O95196 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CSPG5O95196 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.13■□□□□ 0.17
CSPG5O95196 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 IQSEC3P1-201ENST00000538799 536 ntBASIC16.13■□□□□ 0.17
CSPG5O95196 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
CSPG5O95196 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.13■□□□□ 0.17
CSPG5O95196 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.13■□□□□ 0.17
CSPG5O95196 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.13■□□□□ 0.17
CSPG5O95196 RN7SL555P-201ENST00000584742 339 ntBASIC16.13■□□□□ 0.17
CSPG5O95196 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CSPG5O95196 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.13■□□□□ 0.17
CSPG5O95196 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.13■□□□□ 0.17
CSPG5O95196 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.13■□□□□ 0.17
CSPG5O95196 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
CSPG5O95196 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSPG5O95196 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CSPG5O95196 FKBP4P6-201ENST00000457486 1332 ntBASIC16.13■□□□□ 0.17
CSPG5O95196 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CSPG5O95196 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
CSPG5O95196 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.12■□□□□ 0.17
CSPG5O95196 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 AC138466.3-201ENST00000619983 221 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms