Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SCN2BO60939 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 AGGF1P1-201ENST00000509500 2073 ntBASIC14.26□□□□□ -0.13
SCN2BO60939 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SCN2BO60939 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN2BO60939 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 AL139094.1-201ENST00000405549 1188 ntBASIC14.26□□□□□ -0.13
SCN2BO60939 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN2BO60939 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN2BO60939 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN2BO60939 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN2BO60939 MIR8072-201ENST00000614241 80 ntBASIC14.26□□□□□ -0.13
SCN2BO60939 AC093512.1-201ENST00000617969 520 ntBASIC14.26□□□□□ -0.13
SCN2BO60939 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.26□□□□□ -0.13
SCN2BO60939 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.26□□□□□ -0.13
SCN2BO60939 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SCN2BO60939 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN2BO60939 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SCN2BO60939 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN2BO60939 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN2BO60939 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.25□□□□□ -0.13
SCN2BO60939 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.25□□□□□ -0.13
SCN2BO60939 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.25□□□□□ -0.13
SCN2BO60939 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.25□□□□□ -0.13
SCN2BO60939 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 AC106028.4-201ENST00000614509 607 ntBASIC14.25□□□□□ -0.13
SCN2BO60939 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.25□□□□□ -0.13
SCN2BO60939 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SCN2BO60939 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCN2BO60939 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms